Human Pluripotent Stem Cell Functional Identification Kit
R&D Systems, Inc. a Bio-Techne Brand
Key Product Details
Assay Procedure
Refer to the product datasheet for complete product details.
Briefly, the pluripotency status of human stem cells is verified using the following in vitro differentiation procedure:
- Culture pluripotent cells of interest
- Induce endoderm, mesoderm, and ectoderm differentiation with media supplements
- Evaluate differentiation using germ layer markers and fluorescent ICC
Kit Components
Reagents supplied in the Human Pluripotent Stem Cell Functional Identification Kit (Catalog # SC027B):
- Differentiation Base Media Supplement (50X)
- Ectoderm Differentiation Supplement
- Mesoderm Differentiation Supplement
- Endoderm Differentiation Supplement I
- Endoderm Differentiation Supplement II
- Ectoderm Marker: Goat Anti-Human Otx2 Antigen Affinity-purified Polyclonal Antibody
- Mesoderm Marker: Goat Anti-Human Brachyury Antigen Affinity-purified Polyclonal Antibody
- Endoderm Marker: Goat Anti-Human SOX17 Antigen Affinity-purified Polyclonal Antibody
Note: The quantity of each component in this kit is sufficient to make 200 mL of medium for differentiation. This is enough medium for the differentiation of one 24-well plate for each lineage.
The quantity of each component in this kit is sufficient to differentiate two 24-well plates, or an equivalent surface area, of pluripotent stem cells into hepatocyte-like cells.
Other Supplies Required
Reagents
- RPMI
- BSA, very low endotoxin
- D-MEM/F-12 (1X)
- GlutaMAX™ (Invitrogen or equivalent)
- Penicillin-Streptomycin
- Phosphate Buffered Saline (PBS)
- Trypan Blue Solution
- MEF Conditioned Media (Catalog # AR005 or equivalent)
- StemXVivo™ Culture Matrix (100X) (Catalog # CCM013), Cultrex® PathClear® BME Reduced Growth Factor Basement Membrane Extract (Catalog # 3433-005-01), or equivalent
- Recombinant Human FGF basic (Tissue culture grade; Catalog # 4114-TC or equivalent)
- Accutase® (Innovative Cell Technologies or equivalent)
Materials
- Human pluripotent stem cells
- 24-well culture plates
- 15 mL centrifuge tubes
- 50 mL centrifuge tubes
- 0.2 μm syringe filter
- 10 mL syringe
- Pipettes and pipette tips
- Serological pipettes
Equipment
- 37 °C and 5% CO2 incubator
- Centrifuge
- Hemocytometer
- Inverted microscope
- 37 °C water bath
This protocol is designed for BG01V human embryonic stem (hES) cells and iPS2 human induced pluripotent stem (iPS) cells grown in Mouse Embryonic Fibroblast (MEF) Conditioned Media (Catalog # AR005). If using different cell lines or growth media, this protocol may need to be optimized.
Note: The quality of the human pluripotent cells used in the differentiation is imperative. Use of suboptimal quality or very high passage pluripotent cells can result in decreased differentiation efficiency and/or increased cell death.
Undifferentiated Cell Preparation
Add 1:100 Culture Matrix or Cultrex BME in sterile PBS.

Add 1.1x105 cells/cm2 in MEF Conditioned Media containing 4 ng/mL FGF Basic.

Differentiation Procedures
Ectoderm | Mesoderm | Endoderm | |
Day 1 | Replace media with Ectoderm Differentiation Media. | Replace media with Mesoderm Differentiation Media. | Replace media with Endoderm Differentiation Media. |
Day 2 | Repeat | Repeat media change 12-16 hours later. ICC detection of Brachyury (24-36 hours after initial differentiation) | 16-24 hours later, Replace media with Endoderm Differentiation Media II. |
Day 3 | Repeat | Replace media with Endoderm Differentiation Media II. | |
Day 4 | ICC detection of Otx2. | ICC detection of SOX17. |
Citations for Human Pluripotent Stem Cell Functional Identification Kit (50)
Citations are publications that use Bio-Techne products. Selected citations for Human Pluripotent Stem Cell Functional Identification Kit include:
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Species: Human
Sample Types: Whole Cells
HM Yang et al. (2023), Identification of cell-biologic mechanisms of coronary artery spasm and its ex vivo diagnosis using peripheral blood-derived iPSCs Biomaterials research, 27(1):16.
PMID: 36803875 -
Species: Human
Sample Types: Whole Cells
S Cho et al. (2022), Heterozygous LMNA mutation-carrying iPSC lines from three cardiac laminopathy patients Stem Cell Research, 59(0):102657.
PMID: 34999423 -
Species: Human
Sample Types: Whole Cells
Applications: BioassayHM Lee et al. (2022), Generation of alphaMHC-EGFP knock-in in human pluripotent stem cell line, SNUe003-A-3 using CRISPR/Cas9-based gene targeting Stem Cell Research, 61(0):102779.
PMID: 35427904 -
Species: Human
Sample Types: Transfected Whole Cells
Applications: ICCP Mencke et al. (2022), Generation and characterization of a genetic Parkinson's disease-patient derived iPSC line DJ-1-delP (LCSBi008-A) Stem Cell Research, 62(0):102792.
PMID: 35500378 -
Species: Human
Sample Types: Spheroid
Applications: BioassayJ Jeong et al. (2022), Elimination of Reprogramming Transgenes Facilitates the Differentiation of Induced Pluripotent Stem Cells into Hepatocyte-like Cells and Hepatic Organoids Biology, 11(4).
PMID: 35453693 -
Species: Human
Sample Types: Whole Cells
P Mencke et al. (2022), Generation of isogenic control DJ-1-delP GC13 for the genetic Parkinson's disease-patient derived iPSC line DJ-1-delP (LCSBi008-A-1) Stem Cell Research, 62(0):102815.
PMID: 35617842 -
Species: Human
Sample Types: Transduced Whole Cells
A Kojic et al. (2022), Generation of two induced pluripotent stem cell lines from dilated cardiomyopathy patients carrying heterozygous FLNC mutations Stem Cell Research, 64(0):102928.
PMID: 36194907 -
Species: Human
Sample Types: Whole Cells
M Alonzo et al. (2022), Characterization of an iPSC line NCHi006-A from a patient with hypoplastic left heart syndrome (HLHS) Stem Cell Research, 64(0):102892.
PMID: 35987121 -
Species: Human
Sample Types: Whole Cells
J Contreras et al. (2022), Generation of an induced pluripotent stem cell line NCHi003-A from a 11-year-old male with pulmonary atresia with intact ventricular septum (PA-IVS) Stem Cell Research, 64(0):102893.
PMID: 35987120 -
Species: Human
Sample Types: Whole Cells
J Liu et al. (2022), Generation of a human induced pluripotent stem cell line carrying the TYR c.575C>A (p.Ser192Tyr) and c.1205G>A (p.Arg402Gln) variants in homozygous state using CRISPR-Cas9 genome editing Stem Cell Research, 64(0):102880.
PMID: 35933957 -
Species: Human
Sample Types: Whole Cells
A Caudal et al. (2022), Generation of human induced pluripotent stem cell lines carrying heterozygous PLN mutation from dilated cardiomyopathy patients Oncogene, 63(0):102855.
PMID: 35853412 -
Species: Human
Sample Types: Whole Cells
H Lin et al. (2022), Generation and characterization of a human induced pluripotent stem cell (iPSC) line from a patient with congenital heart disease (CHD) Stem Cell Research, 65(0):102958.
PMID: 36343514 -
Species: Human
Sample Types: Whole Cells
Z Yildirim et al. (2022), Generation of two induced pluripotent stem cell lines from dilated cardiomyopathy patients caused by heterozygous mutations in the HCN4 gene Stem Cell Research, 65(0):102951.
PMID: 36332467 -
Species: Human
Sample Types: Whole Cells
S Adhicary et al. (2022), Establishment of NCHi009-A, an iPSC line from a patient with hypoplastic left heart syndrome (HLHS) carrying a heterozygous NOTCH1 mutation Stem Cell Research, 66(0):103013.
PMID: 36599283 -
Species: Human
Sample Types: Whole Cells
Applications: ICCN Jimenez-Te et al. (2022), Generation of two iPSC lines from long QT syndrome patients carrying SNTA1 variants Stem Cell Research, 66(0):103003.
PMID: 36528013 -
Species: SC027
Sample Types: Whole Cells
Applications: BioassayG Iannello et al. (2021), Generation of the iPSC line CUIMCi003-A derived from a patient with severe early onset obesity Stem Cell Research, 54(0):102432.
PMID: 34214899 -
Species: Human
Sample Types: Whole Cells
JWS Jahng et al. (2021), Generation of three induced pluripotent stem cell lines, SCVIi003-A, SCVIi004-A, SCVIi005-A, from patients with ARVD/C caused by heterozygous mutations in the PKP2 gene Stem Cell Research, 53(0):102284.
PMID: 33743362 -
Species: Human
Sample Types: Whole Cells
A Figiel-Dab et al. (2021), Neurogenic and Neuroprotective Potential of Stem/Stromal Cells Derived from Adipose Tissue Cells, 10(6).
PMID: 34208414 -
Species: Human
Sample Types: Whole Cells
I Boussaad et al. (2021), Integrated, automated maintenance, expansion and differentiation of 2D and 3D patient-derived cellular models for high throughput drug screening Scientific Reports, 11(1):1439.
PMID: 33446877 -
Species: Human
Sample Types: Whole Cells
N Belbachir et al. (2021), Generation of two induced pluripotent stem cell lines from Brugada syndrome affected patients carrying SCN5A mutations Stem Cell Research, 57(0):102605.
PMID: 34856468 -
Species: Human
Sample Types: Whole Cells
C Lee et al. (2021), Generation of three iPSC lines from dilated cardiomyopathy patients carrying a pathogenic LMNA variant Stem Cell Research, 59(0):102638.
PMID: 34954454 -
Species: Human
Sample Types: Whole Cells
SK Sarvestani et al. (2021), Induced organoids derived from patients with ulcerative colitis recapitulate colitic reactivity Nature Communications, 12(1):262.
PMID: 33431859 -
Species: Human
Sample Types: Whole Cells
G Iannello et al. (2021), Derivation and characterization of the induced pluripotent stem cell line CUIMCi004-A from a patient with a novel frameshift variant in exon 18a of OCRL Stem Cell Research, 59(0):102635.
PMID: 35074682 -
Species: Human
Sample Types: Whole Cells
X Cao et al. (2021), Generation of three induced pluripotent stem cell lines from hypertrophic cardiomyopathy patients carrying MYH7 mutations Stem Cell Research, 55(0):102455.
PMID: 34352619 -
Species: Human
Sample Types: Whole Cells
M Machowska et al. (2021), Generation of one control and four iPSCs clones from patients with Emery-Dreifuss muscular dystrophy type 1 Stem Cell Research, 55(0):102487.
PMID: 34419748 -
Species: Human
Sample Types: Whole Cells
H Zhang et al. (2021), Generation of three induced pluripotent stem cell lines (SCVIi014-A, SCVIi015-A, and SCVIi016-A) from patients with LQT1 caused by heterozygous mutations in the KCNQ1 gene Stem Cell Research, 55(0):102492.
PMID: 34411974 -
AJ Duarte et al. (2020), Induced pluripotent stem cell line (INSAi002-A) from a Fabry Disease patient hemizygote for the rare p.W287X mutation Stem Cell Res, 45(0):101794.
PMID: 32388441 -
Species: Human
SB Larsen et al. (2020), Induced pluripotent stem cell line (LCSBi001-A) derived from a patient with Parkinson's disease carrying the p.D620N mutation in VPS35 Stem Cell Res, 45(0):101776.
PMID: 32387898 -
Species: Human
Sample Types: Whole Cells
Applications: BioassayPA Barbuti et al. (2020), Generation of two iPS cell lines (HIHDNDi001-A and HIHDNDi001-B) from a Parkinson�s disease patient carrying the heterozygous p.A30P mutation in SNCA Stem Cell Res, 48(0):101951.
PMID: 32798915 -
Species: Human
Sample Types: Whole Cells
S Pagliari et al. (2020), YAP-TEAD1 control of cytoskeleton dynamics and intracellular tension guides human pluripotent stem cell mesoderm specification Cell Death Differ, 0(0).
PMID: 33116297 -
Species: Human
Sample Types: Whole Cells
Y Zhang et al. (2020), The lncRNA H19 alleviates muscular dystrophy by stabilizing dystrophin Nat Cell Biol, 22(11):1332-1345.
PMID: 33106653 -
Species: Human
Sample Types: Whole Cells
Applications: BioassayP Barbuti et al. (2020), Using High-Content Screening to Generate Single-Cell Gene-Corrected Patient-Derived iPS Clones Reveals Excess Alpha-Synuclein with Familial Parkinson's Disease Point Mutation A30P Cells, 9(9).
PMID: 32927687 -
Species: Human
Sample Types: Whole Cells
PA Barbuti et al. (2020), Generation of two iPS cell lines (HIHDNDi001-A and HIHDNDi001-B) from a Parkinson�s disease patient carrying the heterozygous p.A30P mutation in SNCA Stem Cell Res, 48(0):101951.
PMID: 32798915 -
Species: Human
Sample Types: Whole Cells
S Park et al. (2019), Establishment of PITX3-mCherry knock-in reporter human embryonic stem cell line (WAe009-A-23) Stem Cell Res, 39(0):101499.
PMID: 31352199 -
Species: Human
Sample Types: Whole Cells
S Kanton et al. (2019), Organoid single-cell genomic atlas uncovers human-specific features of brain development Nature, 574(7778):418-422.
PMID: 31619793 -
Species: Human
Sample Types: Whole Cells
C Lu et al. (2019), Generation of a knock-in MAP2-tdTomato reporter human embryonic stem cell line with inducible expression of NEUROG2/1 (NYGCe001-A) Stem Cell Res, 41(0):101643.
PMID: 31707212 -
Species: Human
Sample Types: Whole Cells
AJ Duarte et al. (2019), Induced pluripotent stem cell line (INSAi001-A) from a Gaucher disease type 3 patient compound heterozygote for mutations in the GBA1 gene Stem Cell Res, 41(0):101595.
PMID: 31678773 -
Species: Human
Sample Types: Whole Cells
AL Gagne et al. (2018), Generation of a human Juvenile myelomonocytic leukemia iPSC line, CHOPi001-A, with a mutation in CBL Stem Cell Res, 31(0):157-160.
PMID: 30096712 -
Species: Human
Sample Types: Whole Cells
Y Nakashima et al. (2018), Atorvastatin Inhibits the HIF1?-PPAR Axis, Which Is Essential for Maintaining the Function of Human Induced Pluripotent Stem Cells Mol. Ther., 0(0).
PMID: 29929789 -
Species: Human
Sample Types: Whole Cells
JA Maguire et al. (2018), Generation of Spinocerebellar Ataxia Type 2 induced pluripotent stem cell lines, CHOPi002-A and CHOPi003-A, from patients with abnormal CAG repeats in the coding region of the ATXN2 gene Stem Cell Res, 34(0):101361.
PMID: 30611021 -
Species: Human
Sample Types: Whole Cells
Y Nam et al. (2017), Cord blood cell-derived iPSCs as a new candidate for chondrogenic differentiation and cartilage regeneration Stem Cell Res Ther, 8(1):16.
PMID: 28129782 -
Species: Human
Sample Types: Whole Cells
T Shinozawa et al. (2017), Recapitulation of Clinical Individual Susceptibility to Drug-Induced QT Prolongation in Healthy Subjects Using iPSC-Derived Cardiomyocytes Stem Cell Reports, 0(0).
PMID: 28111276 -
Species: Human
Sample Types: Whole Cells
Applications: ICCGlenda M Halliday (2016), Toll-like receptor 2 is increased in neurons in Parkinson's disease brain and may contribute to alpha-synuclein pathology Acta Neuropathol., 0(0).
PMID: 27888296 -
Species: Human
Sample Types: Whole Cells
Claudia Altomare (2016), Human-induced pluripotent stem cell-derived cardiomyocytes from cardiac progenitor cells: effects of selective ion channel blockade Europace, 18(0):iv67-iv76.
PMID: 28011833 -
Species: Human
Sample Types: Whole Cells
Applications: Bioassay(2016), The Generation of Human Induced Pluripotent Stem Cells from Blood Cells: An Efficient Protocol Using Serial Plating of Reprogrammed Cells by Centrifugation Stem Cells Int, 2016(0):1329459.
PMID: 27579041 -
Species: Human
Sample Types: Whole Cells
Applications: BioassayKrueger et al. (2013), Cholesterol-secreting and statin-responsive hepatocytes from human ES and iPS cells to model hepatic involvement in cardiovascular health. PLoS ONE, 8(7):e67296.
PMID: 23874411 -
Species: Bovine
Sample Types: Whole Cells
Applications: BioassayFurusawa et al. (2013), Characteristics of bovine inner cell mass-derived cell lines and their fate in chimeric conceptuses. Biol Reprod, 89(2):28.
PMID: 23782837 -
Species: Human
Sample Types: Whole Cells
Applications: ICCSzablowska-Gadomska et al. (2012), Treatment with small molecules is an important milestone towards the induction of pluripotency in neural stem cells derived from human cord blood. Acta Neurobiol Exp (Wars), 72(4):337-50.
PMID: 23377265 -
Chen B et al. (0), Inducible overexpression of RUNX1b/c in human embryonic stem cells blocks early hematopoiesis from mesoderm. J Mol Cell Bio9(4):262-273.
PMID: 28992293 -
Species: Human
Sample Types: Whole Cells
Deshpande A et al. (0), Cellular Phenotypes in Human iPSC-Derived Neurons from a Genetic Model of Autism Spectrum Disorder. Cell Re21(10):2678-2687.
PMID: 29212016
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